Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATCTCGCCCATGATGGCCAGGCTGGCTGCAGCTGCC
..((((((((((((((..(((&.)))..)).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017766
GeneSymbolCASZ1
Binding site2927,2968
Score1.0
Seed1
Au0.353
Energy-25.3
Binding len22
Me-4.957
Phylopstem3.966217333333333
Phylopflank3.5935092512499995
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure