Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAATCATCTTACAACTGTTCCTGCT
..((((..(((((((((((((&.)))))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017768
GeneSymbolLRRC40
Binding site586,612
Score1.0
Seed0
Au0.603
Energy-23.2
Binding len21
Me-8.814
Phylopstem0.41071896153846155
Phylopflank0.32082315125
Longest consecutive pairings13
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure