Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCGGCCTCTTCGGCTGCGGA
(((((((((.((((((..(((&)))))))))....))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354609
GeneSymbolBRAF
Binding site322,345
Score0.846
Seed1
Au0.25
Energy-21.0
Binding len23
Me-5.18
Phylopstem1.0488892222222221
Phylopflank1.914465345
Longest consecutive pairings9
Position of longest consecutive pairings14
Pairings in 3prime end6
PositionCDS
2D Structure