Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCTTTTGTATGTTGGGTC
(((((((((((((.((((....&))))..))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017773
GeneSymbolLAX1
Binding site216,236
Score0.923
Seed1
Au0.529
Energy-17.7
Binding len20
Me-4.794
Phylopstem0.23970069230769234
Phylopflank0.15572926499999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure