Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCAGTTGTTGTCAGGTT
((((((((.(((((...(((((&))))).))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017773
GeneSymbolLAX1
Binding site2788,2808
Score0.846
Seed1
Au0.603
Energy-16.9
Binding len20
Me-5.962
Phylopstem0.1699272125
Phylopflank0.22107179625000006
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure