Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGAAAACTGCGGCAGCAAG
((((.(((((((((...((((&))))....))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017778
GeneSymbolNSD3
Binding site1921,1944
Score0.923
Seed0
Au0.515
Energy-23.9
Binding len23
Me-9.025
Phylopstem3.592138444444445
Phylopflank3.7181028874999997
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure