Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTACAGACTGCAGTGGAAA
((.((.(((((((((((((..&))))))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017779
GeneSymbolDEPDC1
Binding site1294,1314
Score0.846
Seed0
Au0.632
Energy-19.3
Binding len20
Me-7.396
Phylopstem0.29329658571428574
Phylopflank0.38781299
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure