Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCGCAGCCACCGCAGC
((((.(((((((((((..(((&))))))))))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017780
GeneSymbolCHD7
Binding site1008,1031
Score0.846
Seed0
Au0.235
Energy-24.3
Binding len23
Me-8.057
Phylopstem0.8477724595454545
Phylopflank3.51982536375
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure