Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAGCTCCCCCCAGGGCCCCCCAGCACCTACAGCTGGGGCTGCAGG
((((((((.(((((((.((((&.))))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017781
GeneSymbolCYP2W1
Binding site1800,1848
Score0.846
Seed1
Au0.294
Energy-29.2
Binding len22
Me-4.994
Phylopstem-0.128541175
Phylopflank-1.1140161899999996
Longest consecutive pairings11
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure