Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCCTCAGCTGCC
..(((((((.(((....((((&))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017782
GeneSymbolTASOR2
Binding site5205,5221
Score0.877
Seed1
Au0.471
Energy-20.5
Binding len16
Me-8.025
Phylopstem-0.5844434285714286
Phylopflank0.36603658874999995
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end4
PositionCDS
2D Structure