Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGCTGGCTGCGGCAGCAGG
((((.(((((((((....(((&)))...))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017785
GeneSymbolSPDL1
Binding site81,102
Score0.846
Seed0
Au0.426
Energy-21.1
Binding len21
Me-9.025
Phylopstem0.3067607711111111
Phylopflank0.23701412450000015
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure