Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGATTGAGGAGCTGCAGCTGTT
..((((((((((((...((((&))))........)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017789
GeneSymbolSEMA4C
Binding site1617,1642
Score0.846
Seed1
Au0.382
Energy-22.3
Binding len25
Me-5.925
Phylopstem1.5792512500000002
Phylopflank2.06419285375
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure