Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGAGAATGCCAGGA
.((((((((.(...((((....&))))...).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017790
GeneSymbolRGS3
Binding site586,604
Score0.846
Seed1
Au0.397
Energy-18.5
Binding len18
Me-10.529
Phylopstem1.5111053
Phylopflank1.9781566412500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure