Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGCTGGAGCTGCT
..((((((.((((((...(((&))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017790
GeneSymbolRGS3
Binding site7238,7255
Score0.846
Seed1
Au0.382
Energy-22.4
Binding len17
Me-6.246
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure