Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTTCAGCTGCTGTGTGTCAGT
..((((((((((..((((....&.)))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017794
GeneSymbolFOCAD
Binding site1167,1192
Score0.923
Seed1
Au0.544
Energy-17.5
Binding len16
Me-7.103
Phylopstem2.28177463
Phylopflank2.6228852212500007
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure