Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGGACTTCTTCTTGCTGATATTTGCAACCGCAGTGGTTGCAT
.((((((((((((((((((..&.))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017794
GeneSymbolFOCAD
Binding site5368,5414
Score0.923
Seed1
Au0.456
Energy-25.7
Binding len23
Me-3.793
Phylopstem3.26283117047619
Phylopflank2.5742948775
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure