Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTGCCATTTGTGTGTCTTAGATGGGTT
(((((((((((((.((((((..&))))))...)))))))))......)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017801
GeneSymbolCMTM6
Binding site2251,2280
Score0.923
Seed1
Au0.647
Energy-17.6
Binding len29
Me-4.794
Phylopstem0.5389095789473684
Phylopflank0.46563256125
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
Position3UTR
2D Structure