Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGTTCTCAAGGGCTTGCAGCTGTTGCTGTC
..(((((.(((((((((((.(&.).))))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017801
GeneSymbolCMTM6
Binding site222,253
Score0.923
Seed0
Au0.426
Energy-23.9
Binding len21
Me-7.271
Phylopstem0.5078647272727274
Phylopflank0.23447774500000004
Longest consecutive pairings11
Position of longest consecutive pairings7
Pairings in 3prime end7
PositionCDS
2D Structure