Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&AGTTTACAGCCAGTAGCTT
....(((((((((((((((.(&).))))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017811
GeneSymbolUBE2R2
Binding site3397,3416
Score0.846
Seed0
Au0.529
Energy-19.4
Binding len19
Me-9.547
Phylopstem0.4619258687499999
Phylopflank-0.12538155625000008
Longest consecutive pairings9
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure