Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGCTAGGCAGCTGGAAG
((.(((((((....((.((((&)))).))...))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017812
GeneSymbolCHCHD3
Binding site517,538
Score0.923
Seed0
Au0.471
Energy-20.3
Binding len21
Me-13.813
Phylopstem0.17715185714285717
Phylopflank0.39685590000000004
Longest consecutive pairings7
Position of longest consecutive pairings4
Pairings in 3prime end6
PositionCDS
2D Structure