Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAGGCCTACCTGTGCCTGGCCAAGGCCCGGGTGGAGCAGCTGCGAA
((((((((((((((((.((((&.)))).))...))))........)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017814
GeneSymbolTMEM161A
Binding site1047,1098
Score0.846
Seed1
Au0.309
Energy-23.6
Binding len34
Me-3.938
Phylopstem3.0363169407407407
Phylopflank2.89822042625
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure