Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAACAGCGGCTGCT
..((((((((.(((.(((((.&)))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017815
GeneSymbolHAUS4
Binding site530,548
Score1.0
Seed1
Au0.515
Energy-23.0
Binding len18
Me-8.517
Phylopstem2.49575225
Phylopflank2.5417132625
Longest consecutive pairings8
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure