Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCCAGCCGAGGTTCTCGGCACCGCCTTGAGAGCTTCAGCTGCC
..(((((((.((((.((((((&.))))))..)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017815
GeneSymbolHAUS4
Binding site117,162
Score1.0
Seed1
Au0.471
Energy-22.9
Binding len22
Me-6.935
Phylopstem0.9460634285714286
Phylopflank0.2246973375
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
Position5UTR
2D Structure