Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTAAGCAGGTGCAGCTGGAGG
((.((((((((.((((.((((&))))..)))).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017817
GeneSymbolRAB20
Binding site637,660
Score1.0
Seed0
Au0.441
Energy-24.1
Binding len23
Me-8.842
Phylopstem3.1971534999999998
Phylopflank2.2397141725000003
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure