Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGGTCCCTGTGGCTGTGGCTGTGT
..(((((((((((((..(((.&.))).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017820
GeneSymbolEXD3
Binding site1923,1948
Score0.846
Seed1
Au0.279
Energy-20.6
Binding len19
Me-5.19
Phylopstem0.48592313846153845
Phylopflank0.24140143500000005
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure