Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTATGACCGCCCCTGCCGCTGGCTGCAGA
((((((((((((((((.((((&))))))))))))..........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017820
GeneSymbolEXD3
Binding site2445,2476
Score0.923
Seed1
Au0.294
Energy-24.9
Binding len31
Me-3.938
Phylopstem0.9613831923076923
Phylopflank0.5263322475
Longest consecutive pairings12
Position of longest consecutive pairings19
Pairings in 3prime end7
PositionCDS
2D Structure