Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCGT
.(((((((((...........&))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017826
GeneSymbolSOHLH2
Binding site695,705
Score1.0
Seed1
Au0.574
Energy-17.7
Binding len10
Me-13.079
Phylopstem0.17294427777777777
Phylopflank0.57071593775
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end0
PositionCDS
2D Structure