Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CAGCCTGCAGCTGA
...((((((((((((......&))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017829
GeneSymbolHDHD5
Binding site561,575
Score0.923
Seed0
Au0.368
Energy-20.1
Binding len14
Me-6.748
Phylopstem2.091538461538462
Phylopflank3.4429750000000006
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure