Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGTCGCCTGCTGCT
..(((((.((((((((((((.&))))))))))))..))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017830
GeneSymbolOCIAD1
Binding site131,151
Score1.0
Seed0
Au0.412
Energy-25.7
Binding len20
Me-7.271
Phylopstem-0.3830753325
Phylopflank0.6678228626249999
Longest consecutive pairings12
Position of longest consecutive pairings8
Pairings in 3prime end7
Position5UTR
2D Structure