Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCCAACAGCTGCAAA
(((((((((..(..((((((.&)))))))..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017837
GeneSymbolPIGV
Binding site3874,3893
Score1.0
Seed1
Au0.485
Energy-22.7
Binding len19
Me-10.151
Phylopstem2.534352333333333
Phylopflank0.7276733962499999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure