Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTGCTTCCGGCTTCTTAGATGCCCAGCTGCC
..((((((((((..(((((((&)))))))..)))..............))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017841
GeneSymbolSDHAF2
Binding site589,623
Score0.846
Seed1
Au0.397
Energy-24.7
Binding len34
Me-7.103
Phylopstem-0.03793045416666669
Phylopflank-0.38973284625
Longest consecutive pairings7
Position of longest consecutive pairings27
Pairings in 3prime end7
Position3UTR
2D Structure