Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCCAGGCTGCCAGGA
.(((((((..(...(((((...&)))))..)..))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017842
GeneSymbolSLC48A1
Binding site2266,2284
Score0.846
Seed1
Au0.412
Energy-18.3
Binding len18
Me-11.585
Phylopstem-0.33460897142857143
Phylopflank-0.13953539875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure