Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGATAGCCGTGGCC
.....(((((((((((..(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017842
GeneSymbolSLC48A1
Binding site1361,1378
Score0.846
Seed0
Au0.382
Energy-20.1
Binding len17
Me-13.666
Phylopstem-0.028693000000000003
Phylopflank-0.32047911374999993
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure