Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCTTCATGTGGCTGGAGC
((.(((((((((..((((((.&))))))..).)))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017849
GeneSymbolTMEM127
Binding site1587,1609
Score0.923
Seed0
Au0.382
Energy-20.5
Binding len22
Me-7.641
Phylopstem-0.6039413
Phylopflank-0.18119291624999995
Longest consecutive pairings8
Position of longest consecutive pairings4
Pairings in 3prime end6
Position3UTR
2D Structure