Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTGCACACAGGCCTGCTCCTGTACCGTGCTGCGAC
(((((((.(((((((((((((&)))))))).................)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354639
GeneSymbolPVALEF
Binding site319,357
Score0.846
Seed1
Au0.412
Energy-22.3
Binding len38
Me-6.251
Phylopstem0.2200549333333332
Phylopflank-0.60736482875
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end8
Position5UTR
2D Structure