Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCGAGGACAGCTGCAGCCCCGAGATGTAAACAGGCTTGCAGG
((((((((((((((((.....&.)))))))))))...................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001354639
GeneSymbolPVALEF
Binding site522,564
Score0.846
Seed1
Au0.412
Energy-20.8
Binding len37
Me-3.938
Phylopstem-0.27473889428571424
Phylopflank-0.3276819125
Longest consecutive pairings11
Position of longest consecutive pairings25
Pairings in 3prime end3
Position5UTR
2D Structure