Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGATGTCTGATTTTGGAGCTGCAGCATGCC
..((((((((((((.((((((&.)))))).))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017850
GeneSymbolC1orf109
Binding site963,997
Score1.0
Seed1
Au0.456
Energy-23.1
Binding len22
Me-5.692
Phylopstem0.28533676923076917
Phylopflank-0.00846825800000009
Longest consecutive pairings9
Position of longest consecutive pairings5
Pairings in 3prime end7
Position3UTR
2D Structure