Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGGGAGGAGAAGGTTGTAGGC
....(((((((((((((((((&)))))))......)))))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_017857
GeneSymbolSSH3
Binding site1614,1638
Score0.923
Seed0
Au0.397
Energy-26.4
Binding len24
Me-9.547
Phylopstem-0.25840517391304346
Phylopflank0.41590543999999996
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure