Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGCGGAGCTTCCGGAGGCC&GGCTTCCTGAGCCAGTTCCCTCCT
.((((.((((((((.(((((((&))))))).))...)))))))))).
Details
MiRNAhsa-miR-3180-3p
RefseqIDNM_001330430
GeneSymbolRHCE
Binding site434,458
Score0.846
Seed0
Au0.441
Energy-27.2
Binding len24
Me-6.43
Phylopstem4.0316909090909085
Phylopflank3.2686921275000005
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure