Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAGAAGAAGTGTTACAGCTGGCAGCGCAGA
((((.(((((((((((((.(.&.).))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017864
GeneSymbolINTS8
Binding site3055,3086
Score0.885
Seed0
Au0.559
Energy-22.0
Binding len22
Me-8.057
Phylopstem5.331571428571429
Phylopflank5.6075385375
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure