Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTCGGAAGCGGCCGCGGATCGGGGAATTCTGCTGGCGCTGCAGCTGCAGA
((((((((((((.(((..(((&.))).))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017867
GeneSymbolHPF1
Binding site16,67
Score0.846
Seed1
Au0.294
Energy-25.3
Binding len21
Me-5.227
Phylopstem0.22586349166666667
Phylopflank0.28830061892857145
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure