Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGCGAGCTCCCGCAGCCACAGCCGCAGCCGCAGG
((((.(((((((((((..(((&.)))))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017869
GeneSymbolBANP
Binding site1122,1159
Score0.923
Seed0
Au0.265
Energy-28.2
Binding len21
Me-8.057
Phylopstem1.3489368181818182
Phylopflank2.5642919362500005
Longest consecutive pairings14
Position of longest consecutive pairings6
Pairings in 3prime end6
PositionCDS
2D Structure