Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTAGGTGGCTGTAGCATCCCTACCACCCAGGACACTGGTGCGAA
((((((((((((((.((((((&)))))).)..)))))))).......................))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017872
GeneSymbolTHG1L
Binding site982,1029
Score0.923
Seed1
Au0.441
Energy-19.6
Binding len47
Me-4.673
Phylopstem0.02509548461538457
Phylopflank-0.054880220000000014
Longest consecutive pairings8
Position of longest consecutive pairings29
Pairings in 3prime end7
Position3UTR
2D Structure