Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGCAGCGCCGCAGG
......((((((((((((((.&)))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017873
GeneSymbolASB6
Binding site3952,3969
Score0.846
Seed0
Au0.309
Energy-21.8
Binding len17
Me-15.567
Phylopstem3.24013825
Phylopflank4.351016615
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end7
Position3UTR
2D Structure