Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTGCTGTGAGTGCTCCCTTGTTCAGCTGCAAA
(((((((((((((.((.((((&)))))).))))................))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017879
GeneSymbolZNF416
Binding site954,991
Score0.846
Seed1
Au0.456
Energy-21.0
Binding len37
Me-4.794
Phylopstem-2.2832272413793104
Phylopflank-0.17249565000000006
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure