Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGGGACTGAGCTGTAAG
((((((((.(((((.(..(((&)))..).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017880
GeneSymbolC2orf42
Binding site436,457
Score1.0
Seed1
Au0.515
Energy-19.4
Binding len21
Me-5.729
Phylopstem0.70284975
Phylopflank2.1140043425
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure