Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATTACTAGGAGCTGCAGT
((((((((.(....((((.((&)).))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017881
GeneSymbolNMRK1
Binding site1353,1373
Score0.846
Seed1
Au0.618
Energy-16.8
Binding len20
Me-13.312
Phylopstem0.763544125
Phylopflank2.2307254829999996
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure