Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCCGCCGGGGCAGCCGAGCTGA
...(((((.(((((((..(((&.)))...)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017882
GeneSymbolCLN6
Binding site70,95
Score0.846
Seed0
Au0.294
Energy-22.8
Binding len20
Me-7.571
Phylopstem-0.34937761428571434
Phylopflank-0.32578249000000015
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure