Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTCACAATCTGCATGCTGGAC
.(.((((((((((((((((((&))))).)))).))))).)))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_017887
GeneSymbolCZIB
Binding site654,678
Score0.846
Seed0
Au0.544
Energy-21.5
Binding len24
Me-5.351
Phylopstem3.7758596952380956
Phylopflank4.82774056375
Longest consecutive pairings5
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure