Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGTGGTGCTCAGGA
.((((((((.((.(((((....&))))).)))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_017890
GeneSymbolVPS13B
Binding site5463,5481
Score0.846
Seed1
Au0.529
Energy-17.6
Binding len18
Me-6.325
Phylopstem3.6689483333333337
Phylopflank3.7569384787500004
Longest consecutive pairings6
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure